Kinase Typing and IHC - Screening for Better Chemotherapy?
Posted: Mon Feb 18, 2008 10:36 pm
As suggested by Olga, I opened up a new topic here to share our experiences with Kinase typing and immunohistochemistry.
We were interested in pursuing this because there are no established successful protocols for ASPS, and it is possible that tissue typing tumors can help patients and their doctors arrive at a more successful chemotherapy combination, than trial and error alone. There is a lot of interest in this approach, but until it can be proven to make a difference on a large scale, it will not become "standard practice."
Most studies of this sort can be performed on paraffin blocks. In the U.S., hospitals and labs are required by law to hold onto the paraffin blocks for at least 10 years, so potentially even if a tumor has been removed some years ago, a patient can request that a few sections be sent for testing by an outside lab.
The caveats are that primary tumors and metastatic tumors may have very different profiles. We have only just had our daughter's primary tumor removed (and so those are results we show below), but if we can, we will send some of the metastatic nodules for additional testing because we plan to have these surgically resected.
I was impressed by how little the standard stains at UCLA could tell us about possible useful chemotherapeutic agents: NEGATIVE ER, PR, HER-2, CD20, c-kit, EGFR We requested estrogen and progesterone because of one paper in a gynecological ASPS that reported estrogen and progesterone receptors.
Because 'K''s ASPS was gynecological, we were able to have a charitable organization (for female cancers) pay for typing of her cancer at Clarient (www.clarientinc.com). They had their results in 3 days and also provide digital copies of the slides.
Clarient: c-myc FISH NOT amplified
topo-isomerase II-alpha NOT amplified
thymidylate synthase (TS) Negative
COX2 POSITIVE (100% cells, 1-2 intensity)
PTEN NO loss of expression
Tau POSITIVE (2+)
VEGF POSITIVE (90% cells, 2-3+ intensity)
ERCC1 HIGH (100% cells, 3 intensity)
GST pi Low (0% cells, 0 intensity)
PDFR Alpa Negative
PDFR Beta POSITIVE (100% cells, 2 intensity)
If I understand the results well, certain chemotx seemed less preferred (e.g. cisplatin, taxol, herceptin, etc.), while anti-angiogenic agents (sutent, nexavar, celebrex, vinblastine) were still strong candidate drugs.
UCLA also sent the tumor tissue for c-met staining at Sloan Kettering (this can be done as a routine "second opinion"), and it came back positive - suggesting that the new oral c-met inhibitors under clinical trial would also be good candidates.
In our situation, we've been told that her nodules look completely resectable, so we are looking at chemo as a neoadjuvant, to be used prior to resection. The rationale for neoadjuvant use is that if patient can take a drug for a few cycles before the tumors are resected, one can find out from the pathologist whether the drug looks effective (the pathologist should see cell death) before to committing to many months (or more) of post-op treatment.
The dilemma with many of the newest "smart drugs" is that even if the are effective at stabilizing disease, they may only put the cells asleep so that although they do not grow and divide, they do not die either - raising the risk that they can waken again at some point and regrow. Because ASPS can send out tumors over such a long period, the ideal drug is one that can induce tumor cell death.
In our situation Sutent was somewhat disappointing because we found only 5% treatment effect (cell death) in the primary. Still it helped a little in that it inhibited primary tumor growth for 6 months - and that time allowed us to find a second opinion and surgeon who could resect the tumor cleanly without undue morbidity...
We have a greater respect for pathology as the MRI of her primary suggested more extensive central necrosis. That means MRI may suggest significant death of the tumor, but it might not really be dead. We also tried PET, but we were told the SUV's were so low in her case (2.3) at baseline, it would not be reliable to see a decrease.
Hope this might help someone. Please feel free to email off list with any questions.
We were interested in pursuing this because there are no established successful protocols for ASPS, and it is possible that tissue typing tumors can help patients and their doctors arrive at a more successful chemotherapy combination, than trial and error alone. There is a lot of interest in this approach, but until it can be proven to make a difference on a large scale, it will not become "standard practice."
Most studies of this sort can be performed on paraffin blocks. In the U.S., hospitals and labs are required by law to hold onto the paraffin blocks for at least 10 years, so potentially even if a tumor has been removed some years ago, a patient can request that a few sections be sent for testing by an outside lab.
The caveats are that primary tumors and metastatic tumors may have very different profiles. We have only just had our daughter's primary tumor removed (and so those are results we show below), but if we can, we will send some of the metastatic nodules for additional testing because we plan to have these surgically resected.
I was impressed by how little the standard stains at UCLA could tell us about possible useful chemotherapeutic agents: NEGATIVE ER, PR, HER-2, CD20, c-kit, EGFR We requested estrogen and progesterone because of one paper in a gynecological ASPS that reported estrogen and progesterone receptors.
Because 'K''s ASPS was gynecological, we were able to have a charitable organization (for female cancers) pay for typing of her cancer at Clarient (www.clarientinc.com). They had their results in 3 days and also provide digital copies of the slides.
Clarient: c-myc FISH NOT amplified
topo-isomerase II-alpha NOT amplified
thymidylate synthase (TS) Negative
COX2 POSITIVE (100% cells, 1-2 intensity)
PTEN NO loss of expression
Tau POSITIVE (2+)
VEGF POSITIVE (90% cells, 2-3+ intensity)
ERCC1 HIGH (100% cells, 3 intensity)
GST pi Low (0% cells, 0 intensity)
PDFR Alpa Negative
PDFR Beta POSITIVE (100% cells, 2 intensity)
If I understand the results well, certain chemotx seemed less preferred (e.g. cisplatin, taxol, herceptin, etc.), while anti-angiogenic agents (sutent, nexavar, celebrex, vinblastine) were still strong candidate drugs.
UCLA also sent the tumor tissue for c-met staining at Sloan Kettering (this can be done as a routine "second opinion"), and it came back positive - suggesting that the new oral c-met inhibitors under clinical trial would also be good candidates.
In our situation, we've been told that her nodules look completely resectable, so we are looking at chemo as a neoadjuvant, to be used prior to resection. The rationale for neoadjuvant use is that if patient can take a drug for a few cycles before the tumors are resected, one can find out from the pathologist whether the drug looks effective (the pathologist should see cell death) before to committing to many months (or more) of post-op treatment.
The dilemma with many of the newest "smart drugs" is that even if the are effective at stabilizing disease, they may only put the cells asleep so that although they do not grow and divide, they do not die either - raising the risk that they can waken again at some point and regrow. Because ASPS can send out tumors over such a long period, the ideal drug is one that can induce tumor cell death.
In our situation Sutent was somewhat disappointing because we found only 5% treatment effect (cell death) in the primary. Still it helped a little in that it inhibited primary tumor growth for 6 months - and that time allowed us to find a second opinion and surgeon who could resect the tumor cleanly without undue morbidity...
We have a greater respect for pathology as the MRI of her primary suggested more extensive central necrosis. That means MRI may suggest significant death of the tumor, but it might not really be dead. We also tried PET, but we were told the SUV's were so low in her case (2.3) at baseline, it would not be reliable to see a decrease.
Hope this might help someone. Please feel free to email off list with any questions.